Human Augmentation seemed a total no-brainer for me, but I'm an ardent futurist, so perhaps I'm biased. Still, Humanity Front's leader was the worst combination of self-righteous psychologist and creepy televangelist, and the VAST majority of the complaints against augmentation seemed born out of jealousy and willful ignorance. The idea that humanity is a trait that can somehow be reduced by machines boggles me.
The mage templar war wasn't quite so one sided for me. I'm still far and away on the side of the mages, but while Templar fears and prejudices are massively exaggerated (save in situations where they CAUSE them through fostering an attitude of "you're sin incarnate and we're totally ready to kill you on a suspicion. If we're feling merciful we'll just lobotomize you") and they're completely unwilling to listen to reason (not like they're being drugged by a paranoia inducing magical substance and put in charge of people they're not-so-subtly told by society to hate or anything), SOME of their worries have a kernal in truth. Personally I'd have them as a sort of police force hunting dangerous mages, and have mages trained so you don't end up with another Connor incident (only made possible by his mother's abject terror of the Circle, it should be noted). Basically treat them as any other person who owns a dangerous weapon: don't assume they're going to go on a ramapage and lock them up "just in case".
The mage templar war wasn't quite so one sided for me. I'm still far and away on the side of the mages, but while Templar fears and prejudices are massively exaggerated (save in situations where they CAUSE them through fostering an attitude of "you're sin incarnate and we're totally ready to kill you on a suspicion. If we're feling merciful we'll just lobotomize you") and they're completely unwilling to listen to reason (not like they're being drugged by a paranoia inducing magical substance and put in charge of people they're not-so-subtly told by society to hate or anything), SOME of their worries have a kernal in truth. Personally I'd have them as a sort of police force hunting dangerous mages, and have mages trained so you don't end up with another Connor incident (only made possible by his mother's abject terror of the Circle, it should be noted). Basically treat them as any other person who owns a dangerous weapon: don't assume they're going to go on a ramapage and lock them up "just in case".