I sat for a long, hard time thinking about it.
I talked it over with Legion as much as I could, he made it so much more difficult to decide with his 'Do what you like, I'm not programmed to give a shit'. Attitude!
In the end I rewrote them.
I was still uncomfortable with my choice, granted it's a step better than Genocide (I don't know if there's an adequate term for the mass murder of computer beings, Although they're considered a 'species')
But at the same time, I've still wiped out an entire way of thinking, which is pretty much like a mass lobotomy, removing a races free will and chosen right to hate me...
Still, like I said, lesser of two evils in my mind.